Forestplot R - expanding plot, edit a variable name












0















I prepared a code to visualize my data:



    library(forestplot)
test_data <- data.frame(coef=c(1.14, 0.31, 10.70),
low=c(1.01, 0.12, 1.14),
high=c(1.30, 0.83, 100.16),
boxsize=c(0.2, 0.2, 0.2))
row_names <- cbind(c("Variable", "Variable 1", "Variable 2", "So looooooong and nasty name of the variable"),
c("OR", test_data$coef), c("CI -95%", test_data$low), c("CI +95%", test_data$high) )
test_data <- rbind(rep(NA, 4), test_data)
forestplot(labeltext = row_names,
mean = test_data$coef, upper = test_data$high,
lower = test_data$low,
is.summary=c(TRUE, FALSE, FALSE, FALSE),
boxsize = test_data$boxsize,
zero = 1,
xlog = TRUE,
xlab = "OR (95% CI)",
col = fpColors(lines="black", box="black"),
title="My Happy Happy Title n o happy happy title...n",
ci.vertices = TRUE,
xticks = c(0.1, 1, 10, 100))


It gives a following forestplot:



forestplot



I would like to:



1) expand the plot and diminish font of the plot details on the left for better visualization



2) edit "So looooooong and nasty name of the variable" to move part "name..." below the row like:
"
So looooooong and nasty
name of the variable
"
However, when I write as "/nSo.../n" it gives another row of number from columns "OR" and "CIs".



How correct it?










share|improve this question



























    0















    I prepared a code to visualize my data:



        library(forestplot)
    test_data <- data.frame(coef=c(1.14, 0.31, 10.70),
    low=c(1.01, 0.12, 1.14),
    high=c(1.30, 0.83, 100.16),
    boxsize=c(0.2, 0.2, 0.2))
    row_names <- cbind(c("Variable", "Variable 1", "Variable 2", "So looooooong and nasty name of the variable"),
    c("OR", test_data$coef), c("CI -95%", test_data$low), c("CI +95%", test_data$high) )
    test_data <- rbind(rep(NA, 4), test_data)
    forestplot(labeltext = row_names,
    mean = test_data$coef, upper = test_data$high,
    lower = test_data$low,
    is.summary=c(TRUE, FALSE, FALSE, FALSE),
    boxsize = test_data$boxsize,
    zero = 1,
    xlog = TRUE,
    xlab = "OR (95% CI)",
    col = fpColors(lines="black", box="black"),
    title="My Happy Happy Title n o happy happy title...n",
    ci.vertices = TRUE,
    xticks = c(0.1, 1, 10, 100))


    It gives a following forestplot:



    forestplot



    I would like to:



    1) expand the plot and diminish font of the plot details on the left for better visualization



    2) edit "So looooooong and nasty name of the variable" to move part "name..." below the row like:
    "
    So looooooong and nasty
    name of the variable
    "
    However, when I write as "/nSo.../n" it gives another row of number from columns "OR" and "CIs".



    How correct it?










    share|improve this question

























      0












      0








      0








      I prepared a code to visualize my data:



          library(forestplot)
      test_data <- data.frame(coef=c(1.14, 0.31, 10.70),
      low=c(1.01, 0.12, 1.14),
      high=c(1.30, 0.83, 100.16),
      boxsize=c(0.2, 0.2, 0.2))
      row_names <- cbind(c("Variable", "Variable 1", "Variable 2", "So looooooong and nasty name of the variable"),
      c("OR", test_data$coef), c("CI -95%", test_data$low), c("CI +95%", test_data$high) )
      test_data <- rbind(rep(NA, 4), test_data)
      forestplot(labeltext = row_names,
      mean = test_data$coef, upper = test_data$high,
      lower = test_data$low,
      is.summary=c(TRUE, FALSE, FALSE, FALSE),
      boxsize = test_data$boxsize,
      zero = 1,
      xlog = TRUE,
      xlab = "OR (95% CI)",
      col = fpColors(lines="black", box="black"),
      title="My Happy Happy Title n o happy happy title...n",
      ci.vertices = TRUE,
      xticks = c(0.1, 1, 10, 100))


      It gives a following forestplot:



      forestplot



      I would like to:



      1) expand the plot and diminish font of the plot details on the left for better visualization



      2) edit "So looooooong and nasty name of the variable" to move part "name..." below the row like:
      "
      So looooooong and nasty
      name of the variable
      "
      However, when I write as "/nSo.../n" it gives another row of number from columns "OR" and "CIs".



      How correct it?










      share|improve this question














      I prepared a code to visualize my data:



          library(forestplot)
      test_data <- data.frame(coef=c(1.14, 0.31, 10.70),
      low=c(1.01, 0.12, 1.14),
      high=c(1.30, 0.83, 100.16),
      boxsize=c(0.2, 0.2, 0.2))
      row_names <- cbind(c("Variable", "Variable 1", "Variable 2", "So looooooong and nasty name of the variable"),
      c("OR", test_data$coef), c("CI -95%", test_data$low), c("CI +95%", test_data$high) )
      test_data <- rbind(rep(NA, 4), test_data)
      forestplot(labeltext = row_names,
      mean = test_data$coef, upper = test_data$high,
      lower = test_data$low,
      is.summary=c(TRUE, FALSE, FALSE, FALSE),
      boxsize = test_data$boxsize,
      zero = 1,
      xlog = TRUE,
      xlab = "OR (95% CI)",
      col = fpColors(lines="black", box="black"),
      title="My Happy Happy Title n o happy happy title...n",
      ci.vertices = TRUE,
      xticks = c(0.1, 1, 10, 100))


      It gives a following forestplot:



      forestplot



      I would like to:



      1) expand the plot and diminish font of the plot details on the left for better visualization



      2) edit "So looooooong and nasty name of the variable" to move part "name..." below the row like:
      "
      So looooooong and nasty
      name of the variable
      "
      However, when I write as "/nSo.../n" it gives another row of number from columns "OR" and "CIs".



      How correct it?







      r data-visualization forestplot






      share|improve this question













      share|improve this question











      share|improve this question




      share|improve this question










      asked Dec 30 '18 at 17:06









      MikołajMikołaj

      5710




      5710
























          1 Answer
          1






          active

          oldest

          votes


















          1














          Three possibilities (one more than you asked for):



          1) change text of row labels with txt_gp.



          2) cut column spacing from 6 mm default to half that value by passing colgap a grid call to unit. Fully understanding the options for forestplot requires understanding the grid system of plotting.



          3) add a "n" to the loooong label. (I'm puzzled you didn't see that possibility, since you already had a "n" in the title.)



          row_names <- cbind(c("Variable", "Variable 1", "Variable 2", "So looooooong and nnasty name of the variable"),
          c("OR", test_data$coef), c("CI -95%", test_data$low), c("CI +95%", test_data$high) )

          forestplot(labeltext = row_names,
          mean = test_data$coef, upper = test_data$high,
          lower = test_data$low,
          is.summary=c(TRUE, FALSE, FALSE, FALSE),
          boxsize = test_data$boxsize,
          zero = 1, colgap = unit(3, "mm"), txt_gp=fpTxtGp(label= gpar(cex = 0.7),
          title = gpar(cex = 1) ),
          xlog = TRUE,
          xlab = "OR (95% CI)",
          col = fpColors(lines="black", box="black"),
          title="My Happy Happy Title n o happy happy title...n",
          ci.vertices = TRUE,
          xticks = c(0.1, 1, 10, 100))


          enter image description here



          If I only used a cex of 0.7 in the call to gpar passed to 'label', it also affected the size of the title, so I needed to "reset" the 'cex' of the 'title' back to 1.






          share|improve this answer


























          • Nice, thanks for help. Do you know how decrease interval between plot and title?

            – Mikołaj
            Dec 31 '18 at 13:58











          • Well the first thing to do would be to remove the trailing "n" from the title text. I had noticed the large gap but figured that's what you wnated.

            – 42-
            Dec 31 '18 at 15:41











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          1 Answer
          1






          active

          oldest

          votes








          1 Answer
          1






          active

          oldest

          votes









          active

          oldest

          votes






          active

          oldest

          votes









          1














          Three possibilities (one more than you asked for):



          1) change text of row labels with txt_gp.



          2) cut column spacing from 6 mm default to half that value by passing colgap a grid call to unit. Fully understanding the options for forestplot requires understanding the grid system of plotting.



          3) add a "n" to the loooong label. (I'm puzzled you didn't see that possibility, since you already had a "n" in the title.)



          row_names <- cbind(c("Variable", "Variable 1", "Variable 2", "So looooooong and nnasty name of the variable"),
          c("OR", test_data$coef), c("CI -95%", test_data$low), c("CI +95%", test_data$high) )

          forestplot(labeltext = row_names,
          mean = test_data$coef, upper = test_data$high,
          lower = test_data$low,
          is.summary=c(TRUE, FALSE, FALSE, FALSE),
          boxsize = test_data$boxsize,
          zero = 1, colgap = unit(3, "mm"), txt_gp=fpTxtGp(label= gpar(cex = 0.7),
          title = gpar(cex = 1) ),
          xlog = TRUE,
          xlab = "OR (95% CI)",
          col = fpColors(lines="black", box="black"),
          title="My Happy Happy Title n o happy happy title...n",
          ci.vertices = TRUE,
          xticks = c(0.1, 1, 10, 100))


          enter image description here



          If I only used a cex of 0.7 in the call to gpar passed to 'label', it also affected the size of the title, so I needed to "reset" the 'cex' of the 'title' back to 1.






          share|improve this answer


























          • Nice, thanks for help. Do you know how decrease interval between plot and title?

            – Mikołaj
            Dec 31 '18 at 13:58











          • Well the first thing to do would be to remove the trailing "n" from the title text. I had noticed the large gap but figured that's what you wnated.

            – 42-
            Dec 31 '18 at 15:41
















          1














          Three possibilities (one more than you asked for):



          1) change text of row labels with txt_gp.



          2) cut column spacing from 6 mm default to half that value by passing colgap a grid call to unit. Fully understanding the options for forestplot requires understanding the grid system of plotting.



          3) add a "n" to the loooong label. (I'm puzzled you didn't see that possibility, since you already had a "n" in the title.)



          row_names <- cbind(c("Variable", "Variable 1", "Variable 2", "So looooooong and nnasty name of the variable"),
          c("OR", test_data$coef), c("CI -95%", test_data$low), c("CI +95%", test_data$high) )

          forestplot(labeltext = row_names,
          mean = test_data$coef, upper = test_data$high,
          lower = test_data$low,
          is.summary=c(TRUE, FALSE, FALSE, FALSE),
          boxsize = test_data$boxsize,
          zero = 1, colgap = unit(3, "mm"), txt_gp=fpTxtGp(label= gpar(cex = 0.7),
          title = gpar(cex = 1) ),
          xlog = TRUE,
          xlab = "OR (95% CI)",
          col = fpColors(lines="black", box="black"),
          title="My Happy Happy Title n o happy happy title...n",
          ci.vertices = TRUE,
          xticks = c(0.1, 1, 10, 100))


          enter image description here



          If I only used a cex of 0.7 in the call to gpar passed to 'label', it also affected the size of the title, so I needed to "reset" the 'cex' of the 'title' back to 1.






          share|improve this answer


























          • Nice, thanks for help. Do you know how decrease interval between plot and title?

            – Mikołaj
            Dec 31 '18 at 13:58











          • Well the first thing to do would be to remove the trailing "n" from the title text. I had noticed the large gap but figured that's what you wnated.

            – 42-
            Dec 31 '18 at 15:41














          1












          1








          1







          Three possibilities (one more than you asked for):



          1) change text of row labels with txt_gp.



          2) cut column spacing from 6 mm default to half that value by passing colgap a grid call to unit. Fully understanding the options for forestplot requires understanding the grid system of plotting.



          3) add a "n" to the loooong label. (I'm puzzled you didn't see that possibility, since you already had a "n" in the title.)



          row_names <- cbind(c("Variable", "Variable 1", "Variable 2", "So looooooong and nnasty name of the variable"),
          c("OR", test_data$coef), c("CI -95%", test_data$low), c("CI +95%", test_data$high) )

          forestplot(labeltext = row_names,
          mean = test_data$coef, upper = test_data$high,
          lower = test_data$low,
          is.summary=c(TRUE, FALSE, FALSE, FALSE),
          boxsize = test_data$boxsize,
          zero = 1, colgap = unit(3, "mm"), txt_gp=fpTxtGp(label= gpar(cex = 0.7),
          title = gpar(cex = 1) ),
          xlog = TRUE,
          xlab = "OR (95% CI)",
          col = fpColors(lines="black", box="black"),
          title="My Happy Happy Title n o happy happy title...n",
          ci.vertices = TRUE,
          xticks = c(0.1, 1, 10, 100))


          enter image description here



          If I only used a cex of 0.7 in the call to gpar passed to 'label', it also affected the size of the title, so I needed to "reset" the 'cex' of the 'title' back to 1.






          share|improve this answer















          Three possibilities (one more than you asked for):



          1) change text of row labels with txt_gp.



          2) cut column spacing from 6 mm default to half that value by passing colgap a grid call to unit. Fully understanding the options for forestplot requires understanding the grid system of plotting.



          3) add a "n" to the loooong label. (I'm puzzled you didn't see that possibility, since you already had a "n" in the title.)



          row_names <- cbind(c("Variable", "Variable 1", "Variable 2", "So looooooong and nnasty name of the variable"),
          c("OR", test_data$coef), c("CI -95%", test_data$low), c("CI +95%", test_data$high) )

          forestplot(labeltext = row_names,
          mean = test_data$coef, upper = test_data$high,
          lower = test_data$low,
          is.summary=c(TRUE, FALSE, FALSE, FALSE),
          boxsize = test_data$boxsize,
          zero = 1, colgap = unit(3, "mm"), txt_gp=fpTxtGp(label= gpar(cex = 0.7),
          title = gpar(cex = 1) ),
          xlog = TRUE,
          xlab = "OR (95% CI)",
          col = fpColors(lines="black", box="black"),
          title="My Happy Happy Title n o happy happy title...n",
          ci.vertices = TRUE,
          xticks = c(0.1, 1, 10, 100))


          enter image description here



          If I only used a cex of 0.7 in the call to gpar passed to 'label', it also affected the size of the title, so I needed to "reset" the 'cex' of the 'title' back to 1.







          share|improve this answer














          share|improve this answer



          share|improve this answer








          edited Dec 30 '18 at 18:27

























          answered Dec 30 '18 at 18:16









          42-42-

          213k15255399




          213k15255399













          • Nice, thanks for help. Do you know how decrease interval between plot and title?

            – Mikołaj
            Dec 31 '18 at 13:58











          • Well the first thing to do would be to remove the trailing "n" from the title text. I had noticed the large gap but figured that's what you wnated.

            – 42-
            Dec 31 '18 at 15:41



















          • Nice, thanks for help. Do you know how decrease interval between plot and title?

            – Mikołaj
            Dec 31 '18 at 13:58











          • Well the first thing to do would be to remove the trailing "n" from the title text. I had noticed the large gap but figured that's what you wnated.

            – 42-
            Dec 31 '18 at 15:41

















          Nice, thanks for help. Do you know how decrease interval between plot and title?

          – Mikołaj
          Dec 31 '18 at 13:58





          Nice, thanks for help. Do you know how decrease interval between plot and title?

          – Mikołaj
          Dec 31 '18 at 13:58













          Well the first thing to do would be to remove the trailing "n" from the title text. I had noticed the large gap but figured that's what you wnated.

          – 42-
          Dec 31 '18 at 15:41





          Well the first thing to do would be to remove the trailing "n" from the title text. I had noticed the large gap but figured that's what you wnated.

          – 42-
          Dec 31 '18 at 15:41


















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