Group_by not available for tables with mixin columns [Astropy, Table]












1















I am trying to run this code:



from astropy.table import Table
from astroquery.nasa_exoplanet_archive import NasaExoplanetArchive

exoplanets = NasaExoplanetArchive.get_confirmed_planets_table()
df=exoplanets.group_by('pl_orbsmax')
print(df)


And get the error:




NotImplementedError: group_by not available for tables with mixin
columns




I want to simply extract data according to entries in specific columns. How can I convert this table to a format where I can use "group_by"?



I tried to restrict the columns to just a few which I am pretty sure are not mixin, eg:



subset=exoplanets['pl_discmethod','pl_orbsmax', 'pl_bmassj', 'st_mass']


but got the same error. I tried to converting to pandas, but that did not work either.










share|improve this question























  • Related to my answer below, I was able to successfully run your example with no errors using astropy 3.1.

    – Tom Aldcroft
    Jan 2 at 15:52
















1















I am trying to run this code:



from astropy.table import Table
from astroquery.nasa_exoplanet_archive import NasaExoplanetArchive

exoplanets = NasaExoplanetArchive.get_confirmed_planets_table()
df=exoplanets.group_by('pl_orbsmax')
print(df)


And get the error:




NotImplementedError: group_by not available for tables with mixin
columns




I want to simply extract data according to entries in specific columns. How can I convert this table to a format where I can use "group_by"?



I tried to restrict the columns to just a few which I am pretty sure are not mixin, eg:



subset=exoplanets['pl_discmethod','pl_orbsmax', 'pl_bmassj', 'st_mass']


but got the same error. I tried to converting to pandas, but that did not work either.










share|improve this question























  • Related to my answer below, I was able to successfully run your example with no errors using astropy 3.1.

    – Tom Aldcroft
    Jan 2 at 15:52














1












1








1








I am trying to run this code:



from astropy.table import Table
from astroquery.nasa_exoplanet_archive import NasaExoplanetArchive

exoplanets = NasaExoplanetArchive.get_confirmed_planets_table()
df=exoplanets.group_by('pl_orbsmax')
print(df)


And get the error:




NotImplementedError: group_by not available for tables with mixin
columns




I want to simply extract data according to entries in specific columns. How can I convert this table to a format where I can use "group_by"?



I tried to restrict the columns to just a few which I am pretty sure are not mixin, eg:



subset=exoplanets['pl_discmethod','pl_orbsmax', 'pl_bmassj', 'st_mass']


but got the same error. I tried to converting to pandas, but that did not work either.










share|improve this question














I am trying to run this code:



from astropy.table import Table
from astroquery.nasa_exoplanet_archive import NasaExoplanetArchive

exoplanets = NasaExoplanetArchive.get_confirmed_planets_table()
df=exoplanets.group_by('pl_orbsmax')
print(df)


And get the error:




NotImplementedError: group_by not available for tables with mixin
columns




I want to simply extract data according to entries in specific columns. How can I convert this table to a format where I can use "group_by"?



I tried to restrict the columns to just a few which I am pretty sure are not mixin, eg:



subset=exoplanets['pl_discmethod','pl_orbsmax', 'pl_bmassj', 'st_mass']


but got the same error. I tried to converting to pandas, but that did not work either.







python mixins astropy






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asked Jan 2 at 2:50









TheDemonicPenguinTheDemonicPenguin

61




61













  • Related to my answer below, I was able to successfully run your example with no errors using astropy 3.1.

    – Tom Aldcroft
    Jan 2 at 15:52



















  • Related to my answer below, I was able to successfully run your example with no errors using astropy 3.1.

    – Tom Aldcroft
    Jan 2 at 15:52

















Related to my answer below, I was able to successfully run your example with no errors using astropy 3.1.

– Tom Aldcroft
Jan 2 at 15:52





Related to my answer below, I was able to successfully run your example with no errors using astropy 3.1.

– Tom Aldcroft
Jan 2 at 15:52












1 Answer
1






active

oldest

votes


















1














Grouping of mixin columns is implemented as of astropy 3.1:



In [3]: t = Table([[1,2], Time([1,2], format='cxcsec')], names=['x', 'time'])

In [4]: tg = t.group_by('x')

In [5]: tg.groups[1]
Out[5]:
<Table length=1>
x time
int64 object
----- ----------------
2 2.00000000000351


By the way, you can definitively check for mixin columns with the has_mixin_columns property:



In [7]: t.has_mixin_columns
Out[7]: True





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    1 Answer
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    active

    oldest

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    active

    oldest

    votes









    1














    Grouping of mixin columns is implemented as of astropy 3.1:



    In [3]: t = Table([[1,2], Time([1,2], format='cxcsec')], names=['x', 'time'])

    In [4]: tg = t.group_by('x')

    In [5]: tg.groups[1]
    Out[5]:
    <Table length=1>
    x time
    int64 object
    ----- ----------------
    2 2.00000000000351


    By the way, you can definitively check for mixin columns with the has_mixin_columns property:



    In [7]: t.has_mixin_columns
    Out[7]: True





    share|improve this answer




























      1














      Grouping of mixin columns is implemented as of astropy 3.1:



      In [3]: t = Table([[1,2], Time([1,2], format='cxcsec')], names=['x', 'time'])

      In [4]: tg = t.group_by('x')

      In [5]: tg.groups[1]
      Out[5]:
      <Table length=1>
      x time
      int64 object
      ----- ----------------
      2 2.00000000000351


      By the way, you can definitively check for mixin columns with the has_mixin_columns property:



      In [7]: t.has_mixin_columns
      Out[7]: True





      share|improve this answer


























        1












        1








        1







        Grouping of mixin columns is implemented as of astropy 3.1:



        In [3]: t = Table([[1,2], Time([1,2], format='cxcsec')], names=['x', 'time'])

        In [4]: tg = t.group_by('x')

        In [5]: tg.groups[1]
        Out[5]:
        <Table length=1>
        x time
        int64 object
        ----- ----------------
        2 2.00000000000351


        By the way, you can definitively check for mixin columns with the has_mixin_columns property:



        In [7]: t.has_mixin_columns
        Out[7]: True





        share|improve this answer













        Grouping of mixin columns is implemented as of astropy 3.1:



        In [3]: t = Table([[1,2], Time([1,2], format='cxcsec')], names=['x', 'time'])

        In [4]: tg = t.group_by('x')

        In [5]: tg.groups[1]
        Out[5]:
        <Table length=1>
        x time
        int64 object
        ----- ----------------
        2 2.00000000000351


        By the way, you can definitively check for mixin columns with the has_mixin_columns property:



        In [7]: t.has_mixin_columns
        Out[7]: True






        share|improve this answer












        share|improve this answer



        share|improve this answer










        answered Jan 2 at 15:46









        Tom AldcroftTom Aldcroft

        1,305911




        1,305911
































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